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I often use Tribler for torrents. It’s a TOR-like system specialized into torrent, and does work well with any torrents. (I’ll put a warning that the system might not be totally safe against targetted attack, but it should be against standard complaint to ISP)
I can confirm I have already some experience with the fact of VPN usage being flagged as a high change of automated traffic (except it was TOR, which is pretty much identical in this context).
Discord put me a wealth of captcha, Wikipedia refused edition of pages (even with my account. Which IMO looks like an oversight). And many pages just had captchas even when not trying to log-in.